Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802426.1_cds_XP_016479377.1_7052
CDS Infomation

[gene=LOC107800656] [db_xref=GeneID:107800656] [protein=rhodanese-like domain-containing protein 6 isoform X2] [protein_id=XP_016479377.1] [location=join(25049..25102,25193..25443,30092..30173,30600..30682,31059..31191,31975..32137,32435..33171)] [gbkey=CDS]
Sequence

ATGCAGGGAAGCATCTCTCTGCAGTTGAATTCCACTCTGTCCTTCACAATATTGAACGAA
TGTGCATATTTCTCTGGCAGCTGTTTAATTCTCAGTATTTTATTAGGGAACTCTCAGGAC
AAACTGATTCCAAGCAGCAATAACGGAATAGTCCTGATGGATGCAAGGAATTTATATGAG
ACTAGAATCGGGAAGTTCTATACTCCAAATGTGGAGACTTTGGATCCAGAAATCCGGCAG
TACAGCGACCTTCCTTCTTGGATAGATAATAACTCTGAGAAGTTGCGTGGGAACAATATT
CTTATGTATTGTACTGGAGGAATTAGATGCGAGATGGCATCGGCCTATATCAGGTCTAAA
GGTGCCGGCTTTGAAAAGGTTTTCCAGCTTTATGGTGGGATTCAACGATATCTGGAGCAA
TTTCCTGATGGTGGTTTTTTCAGAGGAAAGAATTTTGTCTTTGACCACAGGGTTTCAGTT
GGAAGTTCAGATTCAAGAATTTTGGGTACTTGTCTTCTCTGTAATTCTCCATTTGATGAT
TACTCCTCACGGAGCCGGTGCACATACTGTAGGATGCTTGTATTAGTCTGTGATAATTGC
CGGGAGAAGGATTCTTCTTATGTTTGTGAACTATGCCGGAAAAACAGCCAGTGTATTCAG
CTAACTTCAGCAACAGATTTTGACAACTCAGTGGAAATATCAGAAGTCGCAGAGCTTGAA
GCTGTCTCTACTTCAGACAGAGTAGCAGTACCTGCCTTGGTTTCAGGACCCAAGACATTG
CGAAAATTGAGAATTCTTTGCCTTCATGGTTTTCGCCAGAATGCTTCTGGTTTCAAAGGT
AGAACTGCATCTTTAGCCAAGAAACTCAAGAGCATTGCGGAGCTAGTTTTTGTGGATGCA
CCCCATGAATTGCCTTTCATTTATCAAATTCGTCAAAACTGCGATTCTGCATCAGAACTG
GAAAATAACCATCCACTTTCAGAGAGTTGCAATAAAAAGTTTTCATGGTTAGTTGCACCT
GATCACAAGGGGGAGAACGATTCTGATTGGAAGATAGCTGACAGTCCATTTGATCCTCTT
CAGTACCAGAAACAAACTGAAGGTTTCGATAAATCAATTGCATATTTAAAAGCCTTATAT
TCTAAAGCAGGACCATTTGATGGGATACTGGGTTTTTCACAAGGAGCTGCAATGGCCGCT
TTAGTTTGCCTGCATCAACAGAAGCTAATAGGAGAGATGGAATTCAGATTTGCGATCCTG
TGCTCTGGATTTGCTGTCAATATGAACAATTGTCAGCAAGGATCAATCAATGTTCCTTCA
CTTCATATATTTGGCAGCGACAAGGGTAAAGATAGGCAGATAGCGAATGAAGCTAGTAGA
CACCTTGCTTCTGTGTTTGAGAATGGCTGCTCTGTTGTTATTGAGCATGACTTTGGTCAT
ATAATTCCAACACGACCTCCGTATATAGACCAGATAAAAGATTTCCTCAAACGTTTCCTG
TAA

Peptide Sequence

PEP ID

XP_016479377.1
PEP Infomation

PREDICTED: rhodanese-like domain-containing protein 6 isoform X2 [Nicotiana tabacum]
Sequence

MQGSISLQLNSTLSFTILNECAYFSGSCLILSILLGNSQDKLIPSSNNGIVLMDARNLYE
TRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIRSK
GAGFEKVFQLYGGIQRYLEQFPDGGFFRGKNFVFDHRVSVGSSDSRILGTCLLCNSPFDD
YSSRSRCTYCRMLVLVCDNCREKDSSYVCELCRKNSQCIQLTSATDFDNSVEISEVAELE
AVSTSDRVAVPALVSGPKTLRKLRILCLHGFRQNASGFKGRTASLAKKLKSIAELVFVDA
PHELPFIYQIRQNCDSASELENNHPLSESCNKKFSWLVAPDHKGENDSDWKIADSPFDPL
QYQKQTEGFDKSIAYLKALYSKAGPFDGILGFSQGAAMAALVCLHQQKLIGEMEFRFAIL
CSGFAVNMNNCQQGSINVPSLHIFGSDKGKDRQIANEASRHLASVFENGCSVVIEHDFGH
IIPTRPPYIDQIKDFLKRFL

Transcript Sequence

Gene sequence data has not been registered.